| Scaphyglottis bergeriana (Schltr.) L.O. Williams, 1950 |
| Scaphyglottis confusa (Schltr.) Ames & Correll, 1942 |
| Scaphyglottis crurigera (Bateman ex Lindl.) Ames & Correll, 1942 |
| Scaphyglottis cuneata Schltr., 1918 |
| Scaphyglottis cuneata var. major (C. Schweinf.) C. Schweinf., 1947 |
| Scaphyglottis dubia (A. Rich. & Galeotti) Hemsl., 1883 |
| Scaphyglottis fasciculata Hook., 1841 |
| Scaphyglottis gemma (Rchb. f.) L.O. Williams, 1956 |
| Scaphyglottis graminifolia (Ruiz & Pav.) Poepp. & Endl., 1836 |
| Scaphyglottis hondurensis (Ames) L.O. Williams, 1950 |
| Scaphyglottis imbricata (Lindl.) Dressler, 2002 |
| Scaphyglottis kienastii (Rchb. f.) Hemsl., 1883 |
| Scaphyglottis leucantha Rchb. f., 1849 |
| Scaphyglottis lindeniana (A. Rich. & Galeotti) L.O. Williams, 1941 |
| Scaphyglottis livida (Lindl.) Schltr., 1918 |
| Scaphyglottis longicaulis S. Watson, 1888 |
| Scaphyglottis major (C. Schweinf.) Correll, 1965 |
| Scaphyglottis micrantha (Lindl.) Ames & Correll, 1942 |
| Scaphyglottis minuta (A. Rich. & Galeotti) Garay, 1973 |
| Scaphyglottis minutiflora Ames & Correll, 1942 |